Workshop

This website contains information relevant for the ASM 2016 workshop “Do-it-yourself microbial genome sequence analysis”, as well as links to the presentations that are part of it.
 

Presentations

1. Introduction (Michelle Giglio)
2. [Hands-on] Start_CloVR (W. Florian Fricke)
3. CloVR introduction (W. Florian Fricke)
4. [Hands-on] Run CloVR-Microbe (W. Florian Fricke)
5. [Hands-on] Run CloVR-Comparative (W. Florian Fricke)
   
6. Genome assembly and annotation (Michelle Giglio)
7. Comparative genome analysis (Cesar Arze)
8. [Hands-on] Comparative genome analysis in Sybil (Hervé Tettelin)
9. CloVR Future Directions (Cesar Arze)
10. Examples of comparative genome analyses – Part 1 (Hervé Tettelin)
11. Examples of comparative genome analyses – Part 2 (Tracy Hazen)
12. [Hands-on] Activity Packet 2016
13. [Reference] Manatee tutorial

 

Presenters

1. Michelle Giglio: mgiglio-at-som.umaryland.edu
2. W. Florian Fricke: w.florian.fricke-at-uni-hohenheim.de
3. Cesar Arze: carze-at-uni-hohenheim.de
4. Herve Tettelin: tettelin-at-som.umaryland.edu
5. Tracy Hazen: thazen-at-som.umaryland.edu