Author Archives: Sam Angiuoli

CloVR and IonTorrent

Great post about using CloVR for microbial genome annotation Microbial Annotation in the Cloud: CloVR and Ion Torrent

Posted on October 5, 2012 by Sam Angiuoli
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Release clovr-1.0-RC4

CloVR 1.0-RC4, the fourth release candidate, is available for download. See release notes for more information.

Posted on May 15, 2012 by Sam Angiuoli
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CloVR 1.0-RC3 available for download

The third release candidate of CloVR 1.0-RC3 is available for download. See release notes for more information.

Posted on October 26, 2011 by Sam Angiuoli
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CloVR 1.0-RC2 available for download

The second release candidate of CloVR 1.0-RC2 is available for download. See release notes for more information.

Posted on August 25, 2011 by Sam Angiuoli
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Release candidate for CloVR 1.0 available for download

The first release candidate of CloVR 1.0 is available for download. Highlights of this release include a New and improved web interface with support for adding data, running and monitoring pipelines, and configuring cloud support; Improved support for the DIAG … Continue reading →

Posted on July 1, 2011 by Sam Angiuoli
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CloVR beta-0.5

A new beta release of our virtual appliance, CloVR beta-0.5, is available for download. Highlights from the release include reliability and bug fixes, updated pipelines, and improved automated scaling of cluster instances for 454 and Illumina assembly and annotation pipelines … Continue reading →

Posted on December 22, 2010 by Sam Angiuoli
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Screencast

A screencast using the command line interface to run a small metagenomics analysis for demonstration purposes. This mock demo was presented at Beyond the Genome Cloud Computing Workshop in Boston Oct, 2010. (no audio for now)

Posted on November 1, 2010 by Sam Angiuoli
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CloVR beta-0.4 Available for Download

A new beta release of our virtual appliance, CloVR beta-0.4, is available for download. Highlights from the release include, automated scaling of cluster instances for 454 and Illumina assembly and annotation pipelines (clovrMicrobe), clovrMetagenomics, and BLAST (clovrSearch), updated pipelines, documentation, … Continue reading →

Posted on November 1, 2010 by Sam Angiuoli
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CloVR beta-0.2 available for download

A new beta release of our virtual appliance, CloVR beta-0.2, is now available for download. The new release includes updates to the pipelines for CloVR-16S, CloVR-Microbe, and CloVR-Metagenomics.

Posted on September 2, 2010 by Sam Angiuoli
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On-demand 1280 CPU cluster using EC2

We are using Amazon EC2 to quickly deploy clusters and run searches. We’ve been stress testing this with CloVR over the past few months to make sure our platform scales out as expected. We’ve been very pleased with the results. … Continue reading →

Posted on July 30, 2010 by Sam Angiuoli
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